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Frozen

Introduction

Low temperature stress is a temperature environment that is lower than the lower limit of the optimal growth temperature for plants, which can be called low temperature stress. The lower limit of the optimum growth temperature varies with plant species and growth period. In the GEPSdb database, we have collected and processed 1 set of microarray datasets and 1 set of RNA-seq datasets.

Publication

ID Paper
Potri.001G252900 Zhou, Z., Wang, MJ., Hu, JJ. et al. Improve freezing tolerance in transgenic poplar by overexpressing a ω-3 fatty acid desaturase gene[J]. Molecular Breeding, 2010, 25(4):571-579.
Potri.002G119300 He F, Li HG, Wang JJ. et al. PeSTZ1, a C2H2-type zinc finger transcription factor from Populus euphratica, enhances freezing tolerance through modulation of ROS scavenging by directly regulating PeAPX2. Plant Biotechnol J. 2019 Nov;17(11):2169-2183.
Potri.006G192000 Zhou, Z., Wang, MJ., Zhao, ST. et al. Changes in freezing tolerance in hybrid poplar caused by up- and down-regulation of PtFAD2 gene expression. Transgenic Res. 2010 Aug;19(4):647-54.

Note: Chromosomal location of all functional genes that have been reported

List

Gene Chromosom |Log FC| > 2
GSE43872
Potri.014G109000 Chr14 9.8195254
Potri.012G127500 Chr12 9.7329544
Potri.012G053800 Chr12 9.4545432
Potri.012G058900 Chr12 9.3340012
Potri.019G010900 Chr19 9.092326
Potri.012G127500 Chr12 8.9250933
Potri.019G010900 Chr19 8.9138335
Potri.001G466000 Chr01 8.5252478
Potri.019G011000 Chr19 8.1932145
Potri.012G127500 Chr12 8.0903569
Potri.008G042700 Chr08 7.9979241
Potri.011G047300 Chr11 7.9791273
Potri.012G127500 Chr12 7.7844464
Potri.004G006900 Chr04 7.6234046
Potri.001G088900 Chr01 7.6182898
Potri.014G109000 Chr14 7.4202953
Potri.012G125500 Chr12 7.3983911
Potri.007G111500 Chr07 7.3753781
Potri.001G402600 Chr01 7.3314916
Potri.011G158100 Chr11 7.31314