Gene Expression Database of Poplar under Stress

Introduction

The damage mechanism of heavy metals to plant biofilms. Heavy metals are inducers of lipid peroxidation. When heavy metals treat plants, the production and balance of free radicals in cells are persecuted, leading to the production of a large number of active oxygen free radicals and destroying the structure of the membrane. and function. In the GEPSdb data, we collected and processed 2 sets of microarray datasets and 2 sets of RNA-seq datasets.

Publication

ID	Paper
Potri.001G189500	Wang H, Liu Y, Peng Z, et al. Ectopic Expression of Poplar ABC Transporter PtoABCG36 Confers Cd Tolerance in Arabidopsis thaliana. Int J Mol Sci. 2019 Jul 4;20(13):3293.
Potri.006G076900，Potri.014G195800	Adams JP, Adeli A, Hsu CY, et al. Poplar maintains zinc homeostasis with heavy metal genes HMA4 and PCS1. J Exp Bot. 2011 Jul;62(11):3737-52.
Potri.011G091200	Sun L, Ma Y, Wang H, et al. Overexpression of PtABCC1 contributes to mercury tolerance and accumulation in Arabidopsis and poplar. Biochem Biophys Res Commun. 2018 Mar 18;497(4):997-1002.
Potri.016G053600	Li N, Meng H, Xing H, et al. Genome-wide analysis of MATE transporters and molecular characterization of aluminum resistance in Populus. J Exp Bot. 2017 Nov 28;68(20):5669-5683.
Potri.016G122200	Wei H, Zhou J, Xu C, et al. Identification and Characterization of an OSH1 Thiol Reductase from Populus Trichocarpa. Cells. 2019 Dec 27;9(1):76.
Potri.005G078700	Zhang J, Yang N, Li Y, et al. Overexpression of PeMIPS1 confers tolerance to salt and copper stresses by scavenging reactive oxygen species in transgenic poplar. Tree Physiol. 2018 Oct 1;38(10):1566-1577.

Paper

Potri.001G189500

Wang H, Liu Y, Peng Z, et al. Ectopic Expression of Poplar ABC Transporter PtoABCG36 Confers Cd Tolerance in Arabidopsis thaliana. Int J Mol Sci. 2019 Jul 4;20(13):3293.

Potri.006G076900，Potri.014G195800

Adams JP, Adeli A, Hsu CY, et al. Poplar maintains zinc homeostasis with heavy metal genes HMA4 and PCS1. J Exp Bot. 2011 Jul;62(11):3737-52.

Potri.011G091200

Sun L, Ma Y, Wang H, et al. Overexpression of PtABCC1 contributes to mercury tolerance and accumulation in Arabidopsis and poplar. Biochem Biophys Res Commun. 2018 Mar 18;497(4):997-1002.

Potri.016G053600

Li N, Meng H, Xing H, et al. Genome-wide analysis of MATE transporters and molecular characterization of aluminum resistance in Populus. J Exp Bot. 2017 Nov 28;68(20):5669-5683.

Potri.016G122200

Wei H, Zhou J, Xu C, et al. Identification and Characterization of an OSH1 Thiol Reductase from Populus Trichocarpa. Cells. 2019 Dec 27;9(1):76.

Potri.005G078700

Zhang J, Yang N, Li Y, et al. Overexpression of PeMIPS1 confers tolerance to salt and copper stresses by scavenging reactive oxygen species in transgenic poplar. Tree Physiol. 2018 Oct 1;38(10):1566-1577.

Anlysise of DEGs under stress

Note: The distribution of DEGs (Log FC <-2 on the left and Log FC > 2 on the right)

List

Gene	Chromosom	\|Log FC\| > 2
Gene	Chromosom	GSE9748	GSE19297
Potri.014G038700	Chr14	4.401991
Potri.002G188300	Chr02	4.36389
Potri.004G040600	Chr04	4.340878
Potri.019G124600	Chr19	3.823622
Potri.019G124400	Chr19	3.787744
Potri.001G236400	Chr01	3.77676
Potri.019G124400	Chr19	3.752365
Potri.019G124600	Chr19	3.747934
Potri.019G124400	Chr19	3.730964
Potri.019G124600	Chr19	3.659058
Potri.004G040600	Chr04	3.656215
Potri.019G124400	Chr19	3.593331
Potri.003G158200	Chr03	3.564093
Potri.004G034800	Chr04	3.551027
Potri.019G124600	Chr19	3.476438
Potri.004G040600	Chr04	3.471643
Potri.001G102400	Chr01	3.415226
Potri.004G182000	Chr04	3.358013
Potri.019G124400	Chr19	3.334779
Potri.019G124400	Chr19	3.25996

Metal

Introduction

Publication

Anlysise of DEGs under stress

List